FORESTER 1.8

forester.tools
Class transfersBranchLenghts

java.lang.Object
  |
  +--forester.tools.transfersBranchLenghts

public class transfersBranchLenghts
extends java.lang.Object

Version:
1.100 -- last modified: 07/03/01
Author:
Christian M. Zmasek

Constructor Summary
transfersBranchLenghts()
           
 
Method Summary
static void main(java.lang.String[] args)
          Transfers branch length values from one Tree to another.
 
Methods inherited from class java.lang.Object
, clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

transfersBranchLenghts

public transfersBranchLenghts()
Method Detail

main

public static void main(java.lang.String[] args)
Transfers branch length values from one Tree to another. It is mainly a "main method" for method "copyBranchLengthValuesFrom( Tree )" of forester.tree.Tree, to be used in other (Perl) programs.
Parameters:
args[0] - Filename (String) for Tree which has correct branch length values
args[1] - String Filename (String) for Tree to which the branch lengths of the first Tree are to be copied, both Trees must only differ in their branch length values, i.e. topology and sequence names, etc. must be the same
args[2] - String Filename (String) for outputfile
args[3] - R to reroot both trees in the same manner
See Also:
Tree.copyBranchLengthValuesFrom( Tree )

FORESTER 1.8