FORESTER 1.8

Package forester.tools

Class Summary
DistanceCalculator  
DoRIO  
Int  
NameAndValues  
OE Implements Oliver Eulenstein's algorithm for speciation - duplication inference.
RIO  
SDI Abstract class from with classes SDIse and OE inherit.
SDIdirectory Allows to infer duplications - speciations on all (rooted or unrooted) gene trees in a directory by using method "infer" of class SDIunrooted.
SDIse Implements our algorithm for speciation - duplication inference (SDI).
SDIunrooted Allows to infer duplications - speciations on a unrooted gene tree.
transfersBranchLenghts  
 


FORESTER 1.8