Software developed for exploring the consequences of different single sequence SCFG designs in predicting RNA secondary structure.
This is the full CONUS package (without datasets) as a gzip'ed tar ball (382 KB).
This package contains source, guides, and GNU configure script. CONUS was written in ANSI C and tested on Mandrake Linux.
[See below for a download which includes the datasets.]
Dowell, RD and Eddy, SR. Evaluation of Several Lightweight Stochastic Context Free Grammars for RNA Secondary Structure Prediction. BMC Bioinformatics 5:71 (2004). [Reprint] [Abstract] [reprint (PDF)]
gzip'ed tar ball (1064 KB), containing:
Brief description of how the CONUS programs were used to generate the results reported in the paper.